DIF-FRAC RNA Associated Proteins

• Table of identified RNA associated proteins (xlsx)
  DIF-FRAC scores, pvalues and annotations for proteins from HEK293T, Hemolysate and mESCs experiments.
• Table of top RNA associated proteins (pdf)
  Top identified RNA associated proteins.

Ribonucleoprotein Complexes

• Table of identified human ribonucleoprotein complexes (xlsx)
  Uniprot accs and genenames of proteins in identified ribonucleoprotein complexes

Cytoscape Network

• Cytoscape Network

Processed Elution Files (.elut format)

• Hek293 SEC Control Replicate 1
• Hek293 SEC RNAseA Replicate 1
• Hek293 SEC Control Replicate 2
• Hek293 SEC RNAseA Replicate 2
• MESC SEC Control
• MESC SEC RNAseA

Code

• Diffrac Code(GitHub)

Docker

• Diffrac Docker image

1. Load docker image: docker load --input diffrac_docker.tar
2. Run docker image: docker run -it kdrew/diffrac_docker /bin/bash
3. Run unit tests: python test/test_diffrac.py

License

• CC0 (+BY)
• Data associated with this website are free to download and share. They are governed by the Creative Commons Zero license, which means that they are a part of the public domain, and every use of them is allowed. If you make extensive use of data from this data set, please credit the authors and when appropriate the authors of the source data (see about for references).